BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007E07SP1|AL425711
(723 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1627 1415 0.0
>3x_Contig1627
Length = 15708
Score = 1415 bits (713), Expect = 0.0
Identities = 721/723 (99%), Gaps = 1/723 (0%)
Strand = Plus / Plus
Query: 1 agctcacaccgatgattcaaagaatccagattgtaagattaagattgcccatggtacgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2490 agctcacaccgatgattcaaagaatccagattgtaagattaagattgcccatggtacgac 2549
Query: 61 aacgttggcgttcagatttaaaggaggaattatcgtggcggtagattctcgtgccactgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2550 aacgttggcgttcagatttaaaggaggaattatcgtggcggtagattctcgtgccactgc 2609
Query: 121 aggtcaatggattgcttcacaaacggtgaagaaagttatcgaaatcaacccatttttgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2610 aggtcaatggattgcttcacaaacggtgaagaaagttatcgaaatcaacccatttttgct 2669
Query: 181 aggtaccatggccggtggtgctgctgattgtcaattttgggaaacttggttaggatcaca 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2670 aggtac-atggccggtggtgctgctgattgtcaattttgggaaacttggttaggatcaca 2728
Query: 241 atgccgtttacatgaattaagagaaaaggaaaggatttccgtcgcagcagcatcaaagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2729 atgccgtttacatgaattaagagaaaaggaaaggatttccgtcgcagcagcatcaaagat 2788
Query: 301 tttgagtaatttggtttatgaatataaaggggctggtttgtcaatgggtaccatgatctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2789 tttgagtaatttggtttatgaatataaaggggctggtttgtcaatgggtaccatgatctg 2848
Query: 361 tgggtatacaaagaaggagggcccaaccatttattatgtcgattctgacggaacaagatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2849 tgggtatacaaagaaggagggcccaaccatttattatgtcgattctgacggaacaagatt 2908
Query: 421 gcmaggtgacctattctgtgtgggttcagggcaaacattcgcttatggtgttctagatgc 480
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2909 gcaaggtgacctattctgtgtgggttcagggcaaacattcgcttatggtgttctagatgc 2968
Query: 481 taattaccgttgggatctatcggtagaagaagcgctatatatagggaaacgttctattct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2969 taattaccgttgggatctatcggtagaagaagcgctatatatagggaaacgttctattct 3028
Query: 541 tgcagctgctcatcgtgatgcttattcgggtgggtccattaacttatatcacgtcaccga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3029 tgcagctgctcatcgtgatgcttattcgggtgggtccattaacttatatcacgtcaccga 3088
Query: 601 aaacggatgggtttatcatggtaatcataacgtagatactttattctgggaaataaaaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3089 aaacggatgggtttatcatggtaatcataacgtagatactttattctgggaaataaaaga 3148
Query: 661 aaaggagaaatcattcaataatgtggtaagtcaataattgtactcacttcagttaatata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3149 aaaggagaaatcattcaataatgtggtaagtcaataattgtactcacttcagttaatata 3208
Query: 721 att 723
|||
Sbjct: 3209 att 3211
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5183
Number of Sequences: 1807
Number of extensions: 5183
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 723
length of database: 10,358,551
effective HSP length: 16
effective length of query: 707
effective length of database: 10,329,639
effective search space: 7303054773
effective search space used: 7303054773
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)